BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C10LP1|AL426010
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1589 1585 0.0
>3x_Contig1589
Length = 10239
Score = 1585 bits (799), Expect = 0.0
Identities = 800/801 (99%)
Strand = Plus / Plus
Query: 1 gatctttgttagggtattagagatgcagattccaaatgactccatgattgaggatattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gatctttgttagggtattagagatgcagattccaaatgactccatgattgaggatattgc 894
Query: 61 taagtatgtcaagctaaggagaatctgtgtagagaactgcacggaggcggaaacaaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 taagtatgtcaagctaaggagaatctgtgtagagaactgcacggaggcggaaacaaatga 954
Query: 121 gcagttcttcttccaagaattctattatgtggaacctttgagtttctttaagcttgcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 gcagttcttcttccaagaattctattatgtggaacctttgagtttctttaagcttgcagc 1014
Query: 181 tgagcgtctcatacggaccgatgaatctatatacagagaaatcgtattggaatatatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 tgagcgtctcatacggaccgatgaatctatatacagagaaatcgtattggaatatatgac 1074
Query: 241 atacttatccacattgccatttgtaatgacaagtcaggacctagtgctgattttgaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 atacttatccacattgccatttgtaatgacaagtcaggacctagtgctgattttgaggga 1134
Query: 301 tgtgtttaatttctatgtggataaatatgtgcccaaagtcaatttcaaatacgctatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 tgtgtttaatttctatgtggataaatatgtgcccaaagtcaatttcaaatacgctatggt 1194
Query: 361 tacttcagccaaggagtcatatgacatggactatgatgtgttctacgatcctaacaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 tacttcagccaaggagtcatatgacatggactatgatgtgttctacgatcctaacaacac 1254
Query: 421 cggtgcgcastcatgaataagagcaggggctcagcgggaagtgaacaaaagattcaacca 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 cggtgcgcactcatgaataagagcaggggctcagcgggaagtgaacaaaagattcaacca 1314
Query: 481 tttgaatccctaccgcaatgcttgcatattagcgacctttttgacgttcaattgattttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 tttgaatccctaccgcaatgcttgcatattagcgacctttttgacgttcaattgattttt 1374
Query: 541 gtgatatcaaacttgttaacagtattgcaatcgaatggtggaaaccagttctctttcttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gtgatatcaaacttgttaacagtattgcaatcgaatggtggaaaccagttctctttcttg 1434
Query: 601 gcggatatgaaggtcaatgtgttctatgcttcattattaagacaccctgatataagattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 gcggatatgaaggtcaatgtgttctatgcttcattattaagacaccctgatataagattg 1494
Query: 661 aaaacgtcggctttatcattcttctattgtcaacttggagattcttggtactcggaaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 aaaacgtcggctttatcattcttctattgtcaacttggagattcttggtactcggaaaat 1554
Query: 721 agaagtgatttcggctcaaatacggatagcaacttgcccttcccgataaaactatggtta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 agaagtgatttcggctcaaatacggatagcaacttgcccttcccgataaaactatggtta 1614
Query: 781 cctactctcatatcgactttg 801
|||||||||||||||||||||
Sbjct: 1615 cctactctcatatcgactttg 1635
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5596
Number of Sequences: 1807
Number of extensions: 5596
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)